Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4488 |
| Number of amino acids: | 442 |
| Molecular Weight: | 49773.6 Da |
| Theoretical pI: | 6.04 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 6.11% |
| Cysteine CYS (C) | 5 | 1.13% |
| Glutamic Acid GLU (E) | 21 | 4.75% |
| Aspartic Acid ASP (D) | 23 | 5.2% |
| Glycine GLY (G) | 33 | 7.47% |
| Phynylalanine PHE (F) | 22 | 4.98% |
| Isoleucine ILE (I) | 19 | 4.3% |
| Histidine HIS (H) | 7 | 1.58% |
| Lysine LYS (K) | 17 | 3.85% |
| Methionine MET (M) | 14 | 3.17% |
| Leucine LEU (L) | 44 | 9.95% |
| Asparagine ASN (N) | 27 | 6.11% |
| Glutamine GLN (Q) | 12 | 2.71% |
| Proline PRO (P) | 23 | 5.2% |
| Serine SER (S) | 40 | 9.05% |
| Arginine ARG (R) | 23 | 5.2% |
| Threonine THR (T) | 20 | 4.52% |
| Tryptophan TRP (W) | 10 | 2.26% |
| Valine VAL (V) | 32 | 7.24% |
| Tyrosine TYR (Y) | 23 | 5.2% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2247 |
| Hydrogen | H | 3423 |
| Nitrogen | N | 591 |
| Oxygen | O | 653 |
| Sulphur | S | 19 |
| Formula | C2247H3423N591O653S19 |
| Total Number of Atoms: | 6933 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 89520 Absorption 0.1% (=1 g/l) 1.799, assuming all pairs of CYS residues form cystines Ext. coefficient 89270 Absorption 0.1% (=1 g/l) 1.794, assuming all CYS residues are reduced |
| Aromaticity: | 0.124 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.11 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.94, 27.83, 23.98] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.6923 |
| Grand average of hydropathicity (GRAVY): | -0.18 |