Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4487 |
| Number of amino acids: | 370 |
| Molecular Weight: | 40599.19 Da |
| Theoretical pI: | 9.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 9.46% |
| Cysteine CYS (C) | 1 | 0.27% |
| Glutamic Acid GLU (E) | 11 | 2.97% |
| Aspartic Acid ASP (D) | 13 | 3.51% |
| Glycine GLY (G) | 24 | 6.49% |
| Phynylalanine PHE (F) | 16 | 4.32% |
| Isoleucine ILE (I) | 24 | 6.49% |
| Histidine HIS (H) | 4 | 1.08% |
| Lysine LYS (K) | 12 | 3.24% |
| Methionine MET (M) | 10 | 2.7% |
| Leucine LEU (L) | 31 | 8.38% |
| Asparagine ASN (N) | 35 | 9.46% |
| Glutamine GLN (Q) | 13 | 3.51% |
| Proline PRO (P) | 23 | 6.22% |
| Serine SER (S) | 38 | 10.27% |
| Arginine ARG (R) | 21 | 5.68% |
| Threonine THR (T) | 12 | 3.24% |
| Tryptophan TRP (W) | 4 | 1.08% |
| Valine VAL (V) | 27 | 7.3% |
| Tyrosine TYR (Y) | 16 | 4.32% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1814 |
| Hydrogen | H | 2835 |
| Nitrogen | N | 505 |
| Oxygen | O | 533 |
| Sulphur | S | 11 |
| Formula | C1814H2835N505O533S11 |
| Total Number of Atoms: | 5698 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 45840 Absorption 0.1% (=1 g/l) 1.129, assuming all pairs of CYS residues form cystines Ext. coefficient 45840 Absorption 0.1% (=1 g/l) 1.129, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 57.96 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.89, 32.43, 23.51] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.5946 |
| Grand average of hydropathicity (GRAVY): | -0.13 |