Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4486 |
| Number of amino acids: | 444 |
| Molecular Weight: | 50358.04 Da |
| Theoretical pI: | 6.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 3.6% |
| Cysteine CYS (C) | 12 | 2.7% |
| Glutamic Acid GLU (E) | 19 | 4.28% |
| Aspartic Acid ASP (D) | 26 | 5.86% |
| Glycine GLY (G) | 33 | 7.43% |
| Phynylalanine PHE (F) | 25 | 5.63% |
| Isoleucine ILE (I) | 16 | 3.6% |
| Histidine HIS (H) | 12 | 2.7% |
| Lysine LYS (K) | 22 | 4.95% |
| Methionine MET (M) | 15 | 3.38% |
| Leucine LEU (L) | 37 | 8.33% |
| Asparagine ASN (N) | 33 | 7.43% |
| Glutamine GLN (Q) | 7 | 1.58% |
| Proline PRO (P) | 20 | 4.5% |
| Serine SER (S) | 37 | 8.33% |
| Arginine ARG (R) | 21 | 4.73% |
| Threonine THR (T) | 34 | 7.66% |
| Tryptophan TRP (W) | 12 | 2.7% |
| Valine VAL (V) | 30 | 6.76% |
| Tyrosine TYR (Y) | 17 | 3.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2246 |
| Hydrogen | H | 3407 |
| Nitrogen | N | 605 |
| Oxygen | O | 663 |
| Sulphur | S | 27 |
| Formula | C2246H3407N605O663S27 |
| Total Number of Atoms: | 6948 |
| Total number of positively charged residues (ARG + LYS): | 43 |
| Total number of negatively charged residues (ASP + GLU): | 45 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 92080 Absorption 0.1% (=1 g/l) 1.829, assuming all pairs of CYS residues form cystines Ext. coefficient 91330 Absorption 0.1% (=1 g/l) 1.814, assuming all CYS residues are reduced |
| Aromaticity: | 0.122 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.36 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.86, 27.70, 19.59] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 69.7522 |
| Grand average of hydropathicity (GRAVY): | -0.34 |