Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4481 |
| Number of amino acids: | 764 |
| Molecular Weight: | 85211.79 Da |
| Theoretical pI: | 6.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 3.93% |
| Cysteine CYS (C) | 30 | 3.93% |
| Glutamic Acid GLU (E) | 42 | 5.5% |
| Aspartic Acid ASP (D) | 42 | 5.5% |
| Glycine GLY (G) | 63 | 8.25% |
| Phynylalanine PHE (F) | 38 | 4.97% |
| Isoleucine ILE (I) | 49 | 6.41% |
| Histidine HIS (H) | 15 | 1.96% |
| Lysine LYS (K) | 42 | 5.5% |
| Methionine MET (M) | 12 | 1.57% |
| Leucine LEU (L) | 61 | 7.98% |
| Asparagine ASN (N) | 44 | 5.76% |
| Glutamine GLN (Q) | 27 | 3.53% |
| Proline PRO (P) | 26 | 3.4% |
| Serine SER (S) | 59 | 7.72% |
| Arginine ARG (R) | 39 | 5.1% |
| Threonine THR (T) | 58 | 7.59% |
| Tryptophan TRP (W) | 7 | 0.92% |
| Valine VAL (V) | 53 | 6.94% |
| Tyrosine TYR (Y) | 27 | 3.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3757 |
| Hydrogen | H | 5885 |
| Nitrogen | N | 1031 |
| Oxygen | O | 1148 |
| Sulphur | S | 42 |
| Formula | C3757H5885N1031O1148S42 |
| Total Number of Atoms: | 11863 |
| Total number of positively charged residues (ARG + LYS): | 81 |
| Total number of negatively charged residues (ASP + GLU): | 84 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 80605 Absorption 0.1% (=1 g/l) 0.946, assuming all pairs of CYS residues form cystines Ext. coefficient 78730 Absorption 0.1% (=1 g/l) 0.924, assuming all CYS residues are reduced |
| Aromaticity: | 0.094 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.50 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.76, 25.13, 18.98] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.1963 |
| Grand average of hydropathicity (GRAVY): | -0.25 |