Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4477 |
| Number of amino acids: | 676 |
| Molecular Weight: | 75922.74 Da |
| Theoretical pI: | 8.79 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 40 | 5.92% |
| Cysteine CYS (C) | 15 | 2.22% |
| Glutamic Acid GLU (E) | 31 | 4.59% |
| Aspartic Acid ASP (D) | 30 | 4.44% |
| Glycine GLY (G) | 38 | 5.62% |
| Phynylalanine PHE (F) | 36 | 5.33% |
| Isoleucine ILE (I) | 38 | 5.62% |
| Histidine HIS (H) | 9 | 1.33% |
| Lysine LYS (K) | 27 | 3.99% |
| Methionine MET (M) | 13 | 1.92% |
| Leucine LEU (L) | 71 | 10.5% |
| Asparagine ASN (N) | 35 | 5.18% |
| Glutamine GLN (Q) | 27 | 3.99% |
| Proline PRO (P) | 29 | 4.29% |
| Serine SER (S) | 71 | 10.5% |
| Arginine ARG (R) | 44 | 6.51% |
| Threonine THR (T) | 42 | 6.21% |
| Tryptophan TRP (W) | 5 | 0.74% |
| Valine VAL (V) | 45 | 6.66% |
| Tyrosine TYR (Y) | 30 | 4.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3390 |
| Hydrogen | H | 5316 |
| Nitrogen | N | 920 |
| Oxygen | O | 1004 |
| Sulphur | S | 28 |
| Formula | C3390H5316N920O1004S28 |
| Total Number of Atoms: | 10658 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 61 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 73075 Absorption 0.1% (=1 g/l) 0.962, assuming all pairs of CYS residues form cystines Ext. coefficient 72200 Absorption 0.1% (=1 g/l) 0.951, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.19 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.28, 25.59, 22.93] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.1067 |
| Grand average of hydropathicity (GRAVY): | -0.13 |