Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4475 |
| Number of amino acids: | 717 |
| Molecular Weight: | 77634.92 Da |
| Theoretical pI: | 6.24 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 6% |
| Cysteine CYS (C) | 7 | 0.98% |
| Glutamic Acid GLU (E) | 29 | 4.04% |
| Aspartic Acid ASP (D) | 41 | 5.72% |
| Glycine GLY (G) | 48 | 6.69% |
| Phynylalanine PHE (F) | 25 | 3.49% |
| Isoleucine ILE (I) | 37 | 5.16% |
| Histidine HIS (H) | 15 | 2.09% |
| Lysine LYS (K) | 39 | 5.44% |
| Methionine MET (M) | 15 | 2.09% |
| Leucine LEU (L) | 82 | 11.44% |
| Asparagine ASN (N) | 50 | 6.97% |
| Glutamine GLN (Q) | 25 | 3.49% |
| Proline PRO (P) | 44 | 6.14% |
| Serine SER (S) | 88 | 12.27% |
| Arginine ARG (R) | 25 | 3.49% |
| Threonine THR (T) | 39 | 5.44% |
| Tryptophan TRP (W) | 5 | 0.7% |
| Valine VAL (V) | 46 | 6.42% |
| Tyrosine TYR (Y) | 14 | 1.95% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3419 |
| Hydrogen | H | 5457 |
| Nitrogen | N | 941 |
| Oxygen | O | 1074 |
| Sulphur | S | 22 |
| Formula | C3419H5457N941O1074S22 |
| Total Number of Atoms: | 10913 |
| Total number of positively charged residues (ARG + LYS): | 64 |
| Total number of negatively charged residues (ASP + GLU): | 70 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 48735 Absorption 0.1% (=1 g/l) 0.628, assuming all pairs of CYS residues form cystines Ext. coefficient 48360 Absorption 0.1% (=1 g/l) 0.623, assuming all CYS residues are reduced |
| Aromaticity: | 0.061 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.70 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.15, 32.08, 23.57] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.3304 |
| Grand average of hydropathicity (GRAVY): | -0.23 |