Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4471 |
| Number of amino acids: | 473 |
| Molecular Weight: | 52874.15 Da |
| Theoretical pI: | 6.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 6.55% |
| Cysteine CYS (C) | 6 | 1.27% |
| Glutamic Acid GLU (E) | 19 | 4.02% |
| Aspartic Acid ASP (D) | 26 | 5.5% |
| Glycine GLY (G) | 36 | 7.61% |
| Phynylalanine PHE (F) | 25 | 5.29% |
| Isoleucine ILE (I) | 19 | 4.02% |
| Histidine HIS (H) | 11 | 2.33% |
| Lysine LYS (K) | 24 | 5.07% |
| Methionine MET (M) | 12 | 2.54% |
| Leucine LEU (L) | 45 | 9.51% |
| Asparagine ASN (N) | 22 | 4.65% |
| Glutamine GLN (Q) | 13 | 2.75% |
| Proline PRO (P) | 24 | 5.07% |
| Serine SER (S) | 45 | 9.51% |
| Arginine ARG (R) | 19 | 4.02% |
| Threonine THR (T) | 25 | 5.29% |
| Tryptophan TRP (W) | 11 | 2.33% |
| Valine VAL (V) | 36 | 7.61% |
| Tyrosine TYR (Y) | 24 | 5.07% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2400 |
| Hydrogen | H | 3642 |
| Nitrogen | N | 622 |
| Oxygen | O | 693 |
| Sulphur | S | 18 |
| Formula | C2400H3642N622O693S18 |
| Total Number of Atoms: | 7375 |
| Total number of positively charged residues (ARG + LYS): | 43 |
| Total number of negatively charged residues (ASP + GLU): | 45 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 96635 Absorption 0.1% (=1 g/l) 1.828, assuming all pairs of CYS residues form cystines Ext. coefficient 96260 Absorption 0.1% (=1 g/l) 1.821, assuming all CYS residues are reduced |
| Aromaticity: | 0.127 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 50.07 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.83, 26.85, 22.62] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.3953 |
| Grand average of hydropathicity (GRAVY): | -0.15 |