Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4469 |
| Number of amino acids: | 433 |
| Molecular Weight: | 49439.27 Da |
| Theoretical pI: | 5.97 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 3.7% |
| Cysteine CYS (C) | 11 | 2.54% |
| Glutamic Acid GLU (E) | 24 | 5.54% |
| Aspartic Acid ASP (D) | 17 | 3.93% |
| Glycine GLY (G) | 33 | 7.62% |
| Phynylalanine PHE (F) | 21 | 4.85% |
| Isoleucine ILE (I) | 38 | 8.78% |
| Histidine HIS (H) | 14 | 3.23% |
| Lysine LYS (K) | 20 | 4.62% |
| Methionine MET (M) | 11 | 2.54% |
| Leucine LEU (L) | 32 | 7.39% |
| Asparagine ASN (N) | 29 | 6.7% |
| Glutamine GLN (Q) | 13 | 3% |
| Proline PRO (P) | 29 | 6.7% |
| Serine SER (S) | 33 | 7.62% |
| Arginine ARG (R) | 13 | 3% |
| Threonine THR (T) | 21 | 4.85% |
| Tryptophan TRP (W) | 9 | 2.08% |
| Valine VAL (V) | 19 | 4.39% |
| Tyrosine TYR (Y) | 30 | 6.93% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2254 |
| Hydrogen | H | 3365 |
| Nitrogen | N | 571 |
| Oxygen | O | 642 |
| Sulphur | S | 22 |
| Formula | C2254H3365N571O642S22 |
| Total Number of Atoms: | 6854 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 94825 Absorption 0.1% (=1 g/l) 1.918, assuming all pairs of CYS residues form cystines Ext. coefficient 94200 Absorption 0.1% (=1 g/l) 1.905, assuming all CYS residues are reduced |
| Aromaticity: | 0.139 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.96 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.41, 28.64, 19.17] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.4688 |
| Grand average of hydropathicity (GRAVY): | -0.26 |