Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4467 |
| Number of amino acids: | 517 |
| Molecular Weight: | 56792.3 Da |
| Theoretical pI: | 4.81 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 46 | 8.9% |
| Cysteine CYS (C) | 5 | 0.97% |
| Glutamic Acid GLU (E) | 29 | 5.61% |
| Aspartic Acid ASP (D) | 26 | 5.03% |
| Glycine GLY (G) | 46 | 8.9% |
| Phynylalanine PHE (F) | 27 | 5.22% |
| Isoleucine ILE (I) | 24 | 4.64% |
| Histidine HIS (H) | 11 | 2.13% |
| Lysine LYS (K) | 13 | 2.51% |
| Methionine MET (M) | 10 | 1.93% |
| Leucine LEU (L) | 50 | 9.67% |
| Asparagine ASN (N) | 16 | 3.09% |
| Glutamine GLN (Q) | 25 | 4.84% |
| Proline PRO (P) | 30 | 5.8% |
| Serine SER (S) | 39 | 7.54% |
| Arginine ARG (R) | 19 | 3.68% |
| Threonine THR (T) | 29 | 5.61% |
| Tryptophan TRP (W) | 16 | 3.09% |
| Valine VAL (V) | 40 | 7.74% |
| Tyrosine TYR (Y) | 16 | 3.09% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2581 |
| Hydrogen | H | 3904 |
| Nitrogen | N | 666 |
| Oxygen | O | 753 |
| Sulphur | S | 15 |
| Formula | C2581H3904N666O753S15 |
| Total Number of Atoms: | 7919 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 55 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 112090 Absorption 0.1% (=1 g/l) 1.974, assuming all pairs of CYS residues form cystines Ext. coefficient 111840 Absorption 0.1% (=1 g/l) 1.969, assuming all CYS residues are reduced |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.42 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.46, 25.34, 26.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.1567 |
| Grand average of hydropathicity (GRAVY): | -0.01 |