Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4460 |
| Number of amino acids: | 740 |
| Molecular Weight: | 79148.06 Da |
| Theoretical pI: | 5.82 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 86 | 11.62% |
| Cysteine CYS (C) | 9 | 1.22% |
| Glutamic Acid GLU (E) | 32 | 4.32% |
| Aspartic Acid ASP (D) | 38 | 5.14% |
| Glycine GLY (G) | 79 | 10.68% |
| Phynylalanine PHE (F) | 32 | 4.32% |
| Isoleucine ILE (I) | 32 | 4.32% |
| Histidine HIS (H) | 17 | 2.3% |
| Lysine LYS (K) | 34 | 4.59% |
| Methionine MET (M) | 20 | 2.7% |
| Leucine LEU (L) | 52 | 7.03% |
| Asparagine ASN (N) | 34 | 4.59% |
| Glutamine GLN (Q) | 35 | 4.73% |
| Proline PRO (P) | 43 | 5.81% |
| Serine SER (S) | 45 | 6.08% |
| Arginine ARG (R) | 24 | 3.24% |
| Threonine THR (T) | 50 | 6.76% |
| Tryptophan TRP (W) | 8 | 1.08% |
| Valine VAL (V) | 41 | 5.54% |
| Tyrosine TYR (Y) | 29 | 3.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3512 |
| Hydrogen | H | 5405 |
| Nitrogen | N | 957 |
| Oxygen | O | 1074 |
| Sulphur | S | 29 |
| Formula | C3512H5405N957O1074S29 |
| Total Number of Atoms: | 10977 |
| Total number of positively charged residues (ARG + LYS): | 58 |
| Total number of negatively charged residues (ASP + GLU): | 70 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 87710 Absorption 0.1% (=1 g/l) 1.108, assuming all pairs of CYS residues form cystines Ext. coefficient 87210 Absorption 0.1% (=1 g/l) 1.102, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.35 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.22, 27.16, 25.68] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.9594 |
| Grand average of hydropathicity (GRAVY): | -0.24 |