Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4459 |
| Number of amino acids: | 441 |
| Molecular Weight: | 49697.27 Da |
| Theoretical pI: | 8.91 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 5.67% |
| Cysteine CYS (C) | 18 | 4.08% |
| Glutamic Acid GLU (E) | 10 | 2.27% |
| Aspartic Acid ASP (D) | 14 | 3.17% |
| Glycine GLY (G) | 25 | 5.67% |
| Phynylalanine PHE (F) | 26 | 5.9% |
| Isoleucine ILE (I) | 27 | 6.12% |
| Histidine HIS (H) | 6 | 1.36% |
| Lysine LYS (K) | 23 | 5.22% |
| Methionine MET (M) | 9 | 2.04% |
| Leucine LEU (L) | 35 | 7.94% |
| Asparagine ASN (N) | 31 | 7.03% |
| Glutamine GLN (Q) | 21 | 4.76% |
| Proline PRO (P) | 32 | 7.26% |
| Serine SER (S) | 33 | 7.48% |
| Arginine ARG (R) | 13 | 2.95% |
| Threonine THR (T) | 35 | 7.94% |
| Tryptophan TRP (W) | 15 | 3.4% |
| Valine VAL (V) | 26 | 5.9% |
| Tyrosine TYR (Y) | 17 | 3.85% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2264 |
| Hydrogen | H | 3428 |
| Nitrogen | N | 582 |
| Oxygen | O | 627 |
| Sulphur | S | 27 |
| Formula | C2264H3428N582O627S27 |
| Total Number of Atoms: | 6928 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 108955 Absorption 0.1% (=1 g/l) 2.192, assuming all pairs of CYS residues form cystines Ext. coefficient 107830 Absorption 0.1% (=1 g/l) 2.170, assuming all CYS residues are reduced |
| Aromaticity: | 0.132 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.67 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.11, 27.44, 17.91] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.5964 |
| Grand average of hydropathicity (GRAVY): | -0.09 |