Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4455 |
| Number of amino acids: | 438 |
| Molecular Weight: | 49938 Da |
| Theoretical pI: | 6.15 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 3.42% |
| Cysteine CYS (C) | 10 | 2.28% |
| Glutamic Acid GLU (E) | 27 | 6.16% |
| Aspartic Acid ASP (D) | 16 | 3.65% |
| Glycine GLY (G) | 32 | 7.31% |
| Phynylalanine PHE (F) | 18 | 4.11% |
| Isoleucine ILE (I) | 29 | 6.62% |
| Histidine HIS (H) | 11 | 2.51% |
| Lysine LYS (K) | 24 | 5.48% |
| Methionine MET (M) | 9 | 2.05% |
| Leucine LEU (L) | 41 | 9.36% |
| Asparagine ASN (N) | 22 | 5.02% |
| Glutamine GLN (Q) | 16 | 3.65% |
| Proline PRO (P) | 25 | 5.71% |
| Serine SER (S) | 37 | 8.45% |
| Arginine ARG (R) | 14 | 3.2% |
| Threonine THR (T) | 24 | 5.48% |
| Tryptophan TRP (W) | 9 | 2.05% |
| Valine VAL (V) | 28 | 6.39% |
| Tyrosine TYR (Y) | 31 | 7.08% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2277 |
| Hydrogen | H | 3447 |
| Nitrogen | N | 573 |
| Oxygen | O | 655 |
| Sulphur | S | 19 |
| Formula | C2277H3447N573O655S19 |
| Total Number of Atoms: | 6971 |
| Total number of positively charged residues (ARG + LYS): | 38 |
| Total number of negatively charged residues (ASP + GLU): | 43 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 96315 Absorption 0.1% (=1 g/l) 1.929, assuming all pairs of CYS residues form cystines Ext. coefficient 95690 Absorption 0.1% (=1 g/l) 1.916, assuming all CYS residues are reduced |
| Aromaticity: | 0.132 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.51 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.62, 26.48, 21.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.2922 |
| Grand average of hydropathicity (GRAVY): | -0.23 |