Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4454 |
| Number of amino acids: | 731 |
| Molecular Weight: | 80740.52 Da |
| Theoretical pI: | 7.45 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 3.97% |
| Cysteine CYS (C) | 26 | 3.56% |
| Glutamic Acid GLU (E) | 48 | 6.57% |
| Aspartic Acid ASP (D) | 37 | 5.06% |
| Glycine GLY (G) | 63 | 8.62% |
| Phynylalanine PHE (F) | 25 | 3.42% |
| Isoleucine ILE (I) | 50 | 6.84% |
| Histidine HIS (H) | 9 | 1.23% |
| Lysine LYS (K) | 47 | 6.43% |
| Methionine MET (M) | 17 | 2.33% |
| Leucine LEU (L) | 65 | 8.89% |
| Asparagine ASN (N) | 35 | 4.79% |
| Glutamine GLN (Q) | 17 | 2.33% |
| Proline PRO (P) | 32 | 4.38% |
| Serine SER (S) | 66 | 9.03% |
| Arginine ARG (R) | 39 | 5.34% |
| Threonine THR (T) | 43 | 5.88% |
| Tryptophan TRP (W) | 3 | 0.41% |
| Valine VAL (V) | 52 | 7.11% |
| Tyrosine TYR (Y) | 28 | 3.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3549 |
| Hydrogen | H | 5676 |
| Nitrogen | N | 968 |
| Oxygen | O | 1091 |
| Sulphur | S | 43 |
| Formula | C3549H5676N968O1091S43 |
| Total Number of Atoms: | 11327 |
| Total number of positively charged residues (ARG + LYS): | 86 |
| Total number of negatively charged residues (ASP + GLU): | 85 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 59845 Absorption 0.1% (=1 g/l) 0.741, assuming all pairs of CYS residues form cystines Ext. coefficient 58220 Absorption 0.1% (=1 g/l) 0.721, assuming all CYS residues are reduced |
| Aromaticity: | 0.077 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.45 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.51, 26.81, 21.75] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.9508 |
| Grand average of hydropathicity (GRAVY): | -0.21 |