Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4453 |
| Number of amino acids: | 735 |
| Molecular Weight: | 81299.05 Da |
| Theoretical pI: | 8.42 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 50 | 6.8% |
| Cysteine CYS (C) | 9 | 1.22% |
| Glutamic Acid GLU (E) | 38 | 5.17% |
| Aspartic Acid ASP (D) | 28 | 3.81% |
| Glycine GLY (G) | 46 | 6.26% |
| Phynylalanine PHE (F) | 33 | 4.49% |
| Isoleucine ILE (I) | 40 | 5.44% |
| Histidine HIS (H) | 19 | 2.59% |
| Lysine LYS (K) | 33 | 4.49% |
| Methionine MET (M) | 10 | 1.36% |
| Leucine LEU (L) | 104 | 14.15% |
| Asparagine ASN (N) | 38 | 5.17% |
| Glutamine GLN (Q) | 32 | 4.35% |
| Proline PRO (P) | 47 | 6.39% |
| Serine SER (S) | 74 | 10.07% |
| Arginine ARG (R) | 37 | 5.03% |
| Threonine THR (T) | 41 | 5.58% |
| Tryptophan TRP (W) | 7 | 0.95% |
| Valine VAL (V) | 30 | 4.08% |
| Tyrosine TYR (Y) | 19 | 2.59% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3647 |
| Hydrogen | H | 5766 |
| Nitrogen | N | 994 |
| Oxygen | O | 1072 |
| Sulphur | S | 19 |
| Formula | C3647H5766N994O1072S19 |
| Total Number of Atoms: | 11498 |
| Total number of positively charged residues (ARG + LYS): | 70 |
| Total number of negatively charged residues (ASP + GLU): | 66 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67310 Absorption 0.1% (=1 g/l) 0.828, assuming all pairs of CYS residues form cystines Ext. coefficient 66810 Absorption 0.1% (=1 g/l) 0.822, assuming all CYS residues are reduced |
| Aromaticity: | 0.080 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.38 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.70, 27.89, 27.48] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 95.0478 |
| Grand average of hydropathicity (GRAVY): | -0.16 |