Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4451 |
| Number of amino acids: | 506 |
| Molecular Weight: | 57114.3 Da |
| Theoretical pI: | 5.35 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 4.94% |
| Cysteine CYS (C) | 6 | 1.19% |
| Glutamic Acid GLU (E) | 34 | 6.72% |
| Aspartic Acid ASP (D) | 26 | 5.14% |
| Glycine GLY (G) | 38 | 7.51% |
| Phynylalanine PHE (F) | 28 | 5.53% |
| Isoleucine ILE (I) | 25 | 4.94% |
| Histidine HIS (H) | 11 | 2.17% |
| Lysine LYS (K) | 27 | 5.34% |
| Methionine MET (M) | 8 | 1.58% |
| Leucine LEU (L) | 52 | 10.28% |
| Asparagine ASN (N) | 25 | 4.94% |
| Glutamine GLN (Q) | 23 | 4.55% |
| Proline PRO (P) | 23 | 4.55% |
| Serine SER (S) | 54 | 10.67% |
| Arginine ARG (R) | 19 | 3.75% |
| Threonine THR (T) | 24 | 4.74% |
| Tryptophan TRP (W) | 16 | 3.16% |
| Valine VAL (V) | 26 | 5.14% |
| Tyrosine TYR (Y) | 16 | 3.16% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2577 |
| Hydrogen | H | 3910 |
| Nitrogen | N | 676 |
| Oxygen | O | 769 |
| Sulphur | S | 14 |
| Formula | C2577H3910N676O769S14 |
| Total Number of Atoms: | 7946 |
| Total number of positively charged residues (ARG + LYS): | 46 |
| Total number of negatively charged residues (ASP + GLU): | 60 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 112215 Absorption 0.1% (=1 g/l) 1.965, assuming all pairs of CYS residues form cystines Ext. coefficient 111840 Absorption 0.1% (=1 g/l) 1.958, assuming all CYS residues are reduced |
| Aromaticity: | 0.119 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.59 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.21, 27.67, 23.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.1898 |
| Grand average of hydropathicity (GRAVY): | -0.35 |