Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4450 |
| Number of amino acids: | 646 |
| Molecular Weight: | 71611.05 Da |
| Theoretical pI: | 8.71 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 6.35% |
| Cysteine CYS (C) | 15 | 2.32% |
| Glutamic Acid GLU (E) | 31 | 4.8% |
| Aspartic Acid ASP (D) | 31 | 4.8% |
| Glycine GLY (G) | 50 | 7.74% |
| Phynylalanine PHE (F) | 33 | 5.11% |
| Isoleucine ILE (I) | 30 | 4.64% |
| Histidine HIS (H) | 12 | 1.86% |
| Lysine LYS (K) | 38 | 5.88% |
| Methionine MET (M) | 15 | 2.32% |
| Leucine LEU (L) | 65 | 10.06% |
| Asparagine ASN (N) | 40 | 6.19% |
| Glutamine GLN (Q) | 24 | 3.72% |
| Proline PRO (P) | 20 | 3.1% |
| Serine SER (S) | 50 | 7.74% |
| Arginine ARG (R) | 33 | 5.11% |
| Threonine THR (T) | 37 | 5.73% |
| Tryptophan TRP (W) | 4 | 0.62% |
| Valine VAL (V) | 55 | 8.51% |
| Tyrosine TYR (Y) | 22 | 3.41% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3182 |
| Hydrogen | H | 5031 |
| Nitrogen | N | 875 |
| Oxygen | O | 944 |
| Sulphur | S | 30 |
| Formula | C3182H5031N875O944S30 |
| Total Number of Atoms: | 10062 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 62 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 55655 Absorption 0.1% (=1 g/l) 0.777, assuming all pairs of CYS residues form cystines Ext. coefficient 54780 Absorption 0.1% (=1 g/l) 0.765, assuming all CYS residues are reduced |
| Aromaticity: | 0.091 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.00 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.35, 24.77, 23.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.39 |
| Grand average of hydropathicity (GRAVY): | -0.12 |