Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4447 |
| Number of amino acids: | 515 |
| Molecular Weight: | 56707.72 Da |
| Theoretical pI: | 5.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 7.96% |
| Cysteine CYS (C) | 8 | 1.55% |
| Glutamic Acid GLU (E) | 24 | 4.66% |
| Aspartic Acid ASP (D) | 34 | 6.6% |
| Glycine GLY (G) | 37 | 7.18% |
| Phynylalanine PHE (F) | 26 | 5.05% |
| Isoleucine ILE (I) | 23 | 4.47% |
| Histidine HIS (H) | 12 | 2.33% |
| Lysine LYS (K) | 31 | 6.02% |
| Methionine MET (M) | 12 | 2.33% |
| Leucine LEU (L) | 46 | 8.93% |
| Asparagine ASN (N) | 26 | 5.05% |
| Glutamine GLN (Q) | 12 | 2.33% |
| Proline PRO (P) | 21 | 4.08% |
| Serine SER (S) | 58 | 11.26% |
| Arginine ARG (R) | 15 | 2.91% |
| Threonine THR (T) | 33 | 6.41% |
| Tryptophan TRP (W) | 11 | 2.14% |
| Valine VAL (V) | 26 | 5.05% |
| Tyrosine TYR (Y) | 19 | 3.69% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2530 |
| Hydrogen | H | 3868 |
| Nitrogen | N | 664 |
| Oxygen | O | 780 |
| Sulphur | S | 20 |
| Formula | C2530H3868N664O780S20 |
| Total Number of Atoms: | 7862 |
| Total number of positively charged residues (ARG + LYS): | 46 |
| Total number of negatively charged residues (ASP + GLU): | 58 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 89310 Absorption 0.1% (=1 g/l) 1.575, assuming all pairs of CYS residues form cystines Ext. coefficient 88810 Absorption 0.1% (=1 g/l) 1.566, assuming all CYS residues are reduced |
| Aromaticity: | 0.109 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.07 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.32, 27.57, 23.88] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.8544 |
| Grand average of hydropathicity (GRAVY): | -0.27 |