Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4446 |
| Number of amino acids: | 843 |
| Molecular Weight: | 93725.33 Da |
| Theoretical pI: | 6.81 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 69 | 8.19% |
| Cysteine CYS (C) | 8 | 0.95% |
| Glutamic Acid GLU (E) | 48 | 5.69% |
| Aspartic Acid ASP (D) | 45 | 5.34% |
| Glycine GLY (G) | 59 | 7% |
| Phynylalanine PHE (F) | 33 | 3.91% |
| Isoleucine ILE (I) | 46 | 5.46% |
| Histidine HIS (H) | 23 | 2.73% |
| Lysine LYS (K) | 47 | 5.58% |
| Methionine MET (M) | 14 | 1.66% |
| Leucine LEU (L) | 79 | 9.37% |
| Asparagine ASN (N) | 37 | 4.39% |
| Glutamine GLN (Q) | 26 | 3.08% |
| Proline PRO (P) | 44 | 5.22% |
| Serine SER (S) | 76 | 9.02% |
| Arginine ARG (R) | 43 | 5.1% |
| Threonine THR (T) | 46 | 5.46% |
| Tryptophan TRP (W) | 21 | 2.49% |
| Valine VAL (V) | 53 | 6.29% |
| Tyrosine TYR (Y) | 26 | 3.08% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4204 |
| Hydrogen | H | 6525 |
| Nitrogen | N | 1149 |
| Oxygen | O | 1241 |
| Sulphur | S | 22 |
| Formula | C4204H6525N1149O1241S22 |
| Total Number of Atoms: | 13141 |
| Total number of positively charged residues (ARG + LYS): | 90 |
| Total number of negatively charged residues (ASP + GLU): | 93 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 154740 Absorption 0.1% (=1 g/l) 1.651, assuming all pairs of CYS residues form cystines Ext. coefficient 154240 Absorption 0.1% (=1 g/l) 1.646, assuming all CYS residues are reduced |
| Aromaticity: | 0.095 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.57 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.61, 25.62, 24.91] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.2467 |
| Grand average of hydropathicity (GRAVY): | -0.29 |