Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4445 |
| Number of amino acids: | 403 |
| Molecular Weight: | 43448.42 Da |
| Theoretical pI: | 6.16 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 37 | 9.18% |
| Cysteine CYS (C) | 3 | 0.74% |
| Glutamic Acid GLU (E) | 12 | 2.98% |
| Aspartic Acid ASP (D) | 30 | 7.44% |
| Glycine GLY (G) | 24 | 5.96% |
| Phynylalanine PHE (F) | 16 | 3.97% |
| Isoleucine ILE (I) | 22 | 5.46% |
| Histidine HIS (H) | 9 | 2.23% |
| Lysine LYS (K) | 29 | 7.2% |
| Methionine MET (M) | 9 | 2.23% |
| Leucine LEU (L) | 38 | 9.43% |
| Asparagine ASN (N) | 18 | 4.47% |
| Glutamine GLN (Q) | 13 | 3.23% |
| Proline PRO (P) | 16 | 3.97% |
| Serine SER (S) | 38 | 9.43% |
| Arginine ARG (R) | 9 | 2.23% |
| Threonine THR (T) | 35 | 8.68% |
| Tryptophan TRP (W) | 1 | 0.25% |
| Valine VAL (V) | 32 | 7.94% |
| Tyrosine TYR (Y) | 12 | 2.98% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1929 |
| Hydrogen | H | 3077 |
| Nitrogen | N | 509 |
| Oxygen | O | 604 |
| Sulphur | S | 12 |
| Formula | C1929H3077N509O604S12 |
| Total Number of Atoms: | 6131 |
| Total number of positively charged residues (ARG + LYS): | 38 |
| Total number of negatively charged residues (ASP + GLU): | 42 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 23505 Absorption 0.1% (=1 g/l) 0.541, assuming all pairs of CYS residues form cystines Ext. coefficient 23380 Absorption 0.1% (=1 g/l) 0.538, assuming all CYS residues are reduced |
| Aromaticity: | 0.072 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.59 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.02, 23.82, 23.82] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.273 |
| Grand average of hydropathicity (GRAVY): | -0.08 |