Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4443 |
| Number of amino acids: | 446 |
| Molecular Weight: | 48741.03 Da |
| Theoretical pI: | 5.25 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 47 | 10.54% |
| Cysteine CYS (C) | 4 | 0.9% |
| Glutamic Acid GLU (E) | 14 | 3.14% |
| Aspartic Acid ASP (D) | 38 | 8.52% |
| Glycine GLY (G) | 47 | 10.54% |
| Phynylalanine PHE (F) | 15 | 3.36% |
| Isoleucine ILE (I) | 22 | 4.93% |
| Histidine HIS (H) | 14 | 3.14% |
| Lysine LYS (K) | 17 | 3.81% |
| Methionine MET (M) | 13 | 2.91% |
| Leucine LEU (L) | 38 | 8.52% |
| Asparagine ASN (N) | 11 | 2.47% |
| Glutamine GLN (Q) | 15 | 3.36% |
| Proline PRO (P) | 18 | 4.04% |
| Serine SER (S) | 29 | 6.5% |
| Arginine ARG (R) | 19 | 4.26% |
| Threonine THR (T) | 22 | 4.93% |
| Tryptophan TRP (W) | 16 | 3.59% |
| Valine VAL (V) | 31 | 6.95% |
| Tyrosine TYR (Y) | 16 | 3.59% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2188 |
| Hydrogen | H | 3322 |
| Nitrogen | N | 590 |
| Oxygen | O | 644 |
| Sulphur | S | 17 |
| Formula | C2188H3322N590O644S17 |
| Total Number of Atoms: | 6761 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 52 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 112090 Absorption 0.1% (=1 g/l) 2.300, assuming all pairs of CYS residues form cystines Ext. coefficient 111840 Absorption 0.1% (=1 g/l) 2.295, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 23.12 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.94, 23.54, 25.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.1614 |
| Grand average of hydropathicity (GRAVY): | -0.13 |