Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4441 |
| Number of amino acids: | 817 |
| Molecular Weight: | 91120.28 Da |
| Theoretical pI: | 6.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 49 | 6% |
| Cysteine CYS (C) | 18 | 2.2% |
| Glutamic Acid GLU (E) | 39 | 4.77% |
| Aspartic Acid ASP (D) | 49 | 6% |
| Glycine GLY (G) | 61 | 7.47% |
| Phynylalanine PHE (F) | 36 | 4.41% |
| Isoleucine ILE (I) | 32 | 3.92% |
| Histidine HIS (H) | 16 | 1.96% |
| Lysine LYS (K) | 31 | 3.79% |
| Methionine MET (M) | 14 | 1.71% |
| Leucine LEU (L) | 82 | 10.04% |
| Asparagine ASN (N) | 35 | 4.28% |
| Glutamine GLN (Q) | 23 | 2.82% |
| Proline PRO (P) | 37 | 4.53% |
| Serine SER (S) | 78 | 9.55% |
| Arginine ARG (R) | 53 | 6.49% |
| Threonine THR (T) | 51 | 6.24% |
| Tryptophan TRP (W) | 16 | 1.96% |
| Valine VAL (V) | 65 | 7.96% |
| Tyrosine TYR (Y) | 32 | 3.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4059 |
| Hydrogen | H | 6295 |
| Nitrogen | N | 1113 |
| Oxygen | O | 1213 |
| Sulphur | S | 32 |
| Formula | C4059H6295N1113O1213S32 |
| Total Number of Atoms: | 12712 |
| Total number of positively charged residues (ARG + LYS): | 84 |
| Total number of negatively charged residues (ASP + GLU): | 88 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 136805 Absorption 0.1% (=1 g/l) 1.501, assuming all pairs of CYS residues form cystines Ext. coefficient 135680 Absorption 0.1% (=1 g/l) 1.489, assuming all CYS residues are reduced |
| Aromaticity: | 0.103 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.78 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.19, 25.83, 22.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.4883 |
| Grand average of hydropathicity (GRAVY): | -0.21 |