Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4437 |
| Number of amino acids: | 444 |
| Molecular Weight: | 45600.32 Da |
| Theoretical pI: | 8.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 48 | 10.81% |
| Cysteine CYS (C) | 14 | 3.15% |
| Glutamic Acid GLU (E) | 16 | 3.6% |
| Aspartic Acid ASP (D) | 22 | 4.95% |
| Glycine GLY (G) | 47 | 10.59% |
| Phynylalanine PHE (F) | 9 | 2.03% |
| Isoleucine ILE (I) | 33 | 7.43% |
| Histidine HIS (H) | 7 | 1.58% |
| Lysine LYS (K) | 40 | 9.01% |
| Methionine MET (M) | 6 | 1.35% |
| Leucine LEU (L) | 28 | 6.31% |
| Asparagine ASN (N) | 31 | 6.98% |
| Glutamine GLN (Q) | 4 | 0.9% |
| Proline PRO (P) | 25 | 5.63% |
| Serine SER (S) | 32 | 7.21% |
| Arginine ARG (R) | 5 | 1.13% |
| Threonine THR (T) | 32 | 7.21% |
| Tryptophan TRP (W) | 4 | 0.9% |
| Valine VAL (V) | 37 | 8.33% |
| Tyrosine TYR (Y) | 4 | 0.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1995 |
| Hydrogen | H | 3256 |
| Nitrogen | N | 552 |
| Oxygen | O | 624 |
| Sulphur | S | 20 |
| Formula | C1995H3256N552O624S20 |
| Total Number of Atoms: | 6447 |
| Total number of positively charged residues (ARG + LYS): | 45 |
| Total number of negatively charged residues (ASP + GLU): | 38 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 28835 Absorption 0.1% (=1 g/l) 0.632, assuming all pairs of CYS residues form cystines Ext. coefficient 27960 Absorption 0.1% (=1 g/l) 0.613, assuming all CYS residues are reduced |
| Aromaticity: | 0.038 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 26.82 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.90, 30.41, 22.07] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.5585 |
| Grand average of hydropathicity (GRAVY): | -0.01 |