Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4432 |
| Number of amino acids: | 924 |
| Molecular Weight: | 103732 Da |
| Theoretical pI: | 5.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 44 | 4.76% |
| Cysteine CYS (C) | 19 | 2.06% |
| Glutamic Acid GLU (E) | 61 | 6.6% |
| Aspartic Acid ASP (D) | 56 | 6.06% |
| Glycine GLY (G) | 55 | 5.95% |
| Phynylalanine PHE (F) | 39 | 4.22% |
| Isoleucine ILE (I) | 63 | 6.82% |
| Histidine HIS (H) | 15 | 1.62% |
| Lysine LYS (K) | 46 | 4.98% |
| Methionine MET (M) | 13 | 1.41% |
| Leucine LEU (L) | 105 | 11.36% |
| Asparagine ASN (N) | 47 | 5.09% |
| Glutamine GLN (Q) | 27 | 2.92% |
| Proline PRO (P) | 44 | 4.76% |
| Serine SER (S) | 87 | 9.42% |
| Arginine ARG (R) | 43 | 4.65% |
| Threonine THR (T) | 51 | 5.52% |
| Tryptophan TRP (W) | 9 | 0.97% |
| Valine VAL (V) | 59 | 6.39% |
| Tyrosine TYR (Y) | 41 | 4.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4647 |
| Hydrogen | H | 7266 |
| Nitrogen | N | 1212 |
| Oxygen | O | 1412 |
| Sulphur | S | 32 |
| Formula | C4647H7266N1212O1412S32 |
| Total Number of Atoms: | 14569 |
| Total number of positively charged residues (ARG + LYS): | 89 |
| Total number of negatively charged residues (ASP + GLU): | 117 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 111715 Absorption 0.1% (=1 g/l) 1.077, assuming all pairs of CYS residues form cystines Ext. coefficient 110590 Absorption 0.1% (=1 g/l) 1.066, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.18 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.20, 25.22, 24.13] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 94.1882 |
| Grand average of hydropathicity (GRAVY): | -0.17 |