Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4430 |
| Number of amino acids: | 666 |
| Molecular Weight: | 78242.97 Da |
| Theoretical pI: | 6.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 4.35% |
| Cysteine CYS (C) | 21 | 3.15% |
| Glutamic Acid GLU (E) | 77 | 11.56% |
| Aspartic Acid ASP (D) | 30 | 4.5% |
| Glycine GLY (G) | 40 | 6.01% |
| Phynylalanine PHE (F) | 27 | 4.05% |
| Isoleucine ILE (I) | 24 | 3.6% |
| Histidine HIS (H) | 15 | 2.25% |
| Lysine LYS (K) | 27 | 4.05% |
| Methionine MET (M) | 11 | 1.65% |
| Leucine LEU (L) | 48 | 7.21% |
| Asparagine ASN (N) | 31 | 4.65% |
| Glutamine GLN (Q) | 68 | 10.21% |
| Proline PRO (P) | 27 | 4.05% |
| Serine SER (S) | 41 | 6.16% |
| Arginine ARG (R) | 72 | 10.81% |
| Threonine THR (T) | 22 | 3.3% |
| Tryptophan TRP (W) | 2 | 0.3% |
| Valine VAL (V) | 29 | 4.35% |
| Tyrosine TYR (Y) | 25 | 3.75% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3351 |
| Hydrogen | H | 5272 |
| Nitrogen | N | 1040 |
| Oxygen | O | 1068 |
| Sulphur | S | 32 |
| Formula | C3351H5272N1040O1068S32 |
| Total Number of Atoms: | 10763 |
| Total number of positively charged residues (ARG + LYS): | 99 |
| Total number of negatively charged residues (ASP + GLU): | 107 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49500 Absorption 0.1% (=1 g/l) 0.633, assuming all pairs of CYS residues form cystines Ext. coefficient 48250 Absorption 0.1% (=1 g/l) 0.617, assuming all CYS residues are reduced |
| Aromaticity: | 0.081 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 71.78 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.27, 20.87, 24.77] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 59.1441 |
| Grand average of hydropathicity (GRAVY): | -1.09 |