Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4429 |
| Number of amino acids: | 313 |
| Molecular Weight: | 33751.96 Da |
| Theoretical pI: | 5.77 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 12.46% |
| Cysteine CYS (C) | 5 | 1.6% |
| Glutamic Acid GLU (E) | 20 | 6.39% |
| Aspartic Acid ASP (D) | 14 | 4.47% |
| Glycine GLY (G) | 23 | 7.35% |
| Phynylalanine PHE (F) | 18 | 5.75% |
| Isoleucine ILE (I) | 19 | 6.07% |
| Histidine HIS (H) | 3 | 0.96% |
| Lysine LYS (K) | 19 | 6.07% |
| Methionine MET (M) | 3 | 0.96% |
| Leucine LEU (L) | 34 | 10.86% |
| Asparagine ASN (N) | 9 | 2.88% |
| Glutamine GLN (Q) | 7 | 2.24% |
| Proline PRO (P) | 24 | 7.67% |
| Serine SER (S) | 23 | 7.35% |
| Arginine ARG (R) | 12 | 3.83% |
| Threonine THR (T) | 10 | 3.19% |
| Tryptophan TRP (W) | 3 | 0.96% |
| Valine VAL (V) | 19 | 6.07% |
| Tyrosine TYR (Y) | 9 | 2.88% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1542 |
| Hydrogen | H | 2411 |
| Nitrogen | N | 393 |
| Oxygen | O | 440 |
| Sulphur | S | 8 |
| Formula | C1542H2411N393O440S8 |
| Total Number of Atoms: | 4794 |
| Total number of positively charged residues (ARG + LYS): | 31 |
| Total number of negatively charged residues (ASP + GLU): | 34 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30160 Absorption 0.1% (=1 g/l) 0.894, assuming all pairs of CYS residues form cystines Ext. coefficient 29910 Absorption 0.1% (=1 g/l) 0.886, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.97 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.59, 25.24, 30.67] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 96.1022 |
| Grand average of hydropathicity (GRAVY): | 0.11 |