Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4428 |
| Number of amino acids: | 748 |
| Molecular Weight: | 83357.4 Da |
| Theoretical pI: | 6.34 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 4.81% |
| Cysteine CYS (C) | 28 | 3.74% |
| Glutamic Acid GLU (E) | 48 | 6.42% |
| Aspartic Acid ASP (D) | 43 | 5.75% |
| Glycine GLY (G) | 55 | 7.35% |
| Phynylalanine PHE (F) | 33 | 4.41% |
| Isoleucine ILE (I) | 40 | 5.35% |
| Histidine HIS (H) | 14 | 1.87% |
| Lysine LYS (K) | 40 | 5.35% |
| Methionine MET (M) | 13 | 1.74% |
| Leucine LEU (L) | 55 | 7.35% |
| Asparagine ASN (N) | 44 | 5.88% |
| Glutamine GLN (Q) | 27 | 3.61% |
| Proline PRO (P) | 35 | 4.68% |
| Serine SER (S) | 63 | 8.42% |
| Arginine ARG (R) | 46 | 6.15% |
| Threonine THR (T) | 40 | 5.35% |
| Tryptophan TRP (W) | 6 | 0.8% |
| Valine VAL (V) | 60 | 8.02% |
| Tyrosine TYR (Y) | 22 | 2.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3645 |
| Hydrogen | H | 5745 |
| Nitrogen | N | 1031 |
| Oxygen | O | 1127 |
| Sulphur | S | 41 |
| Formula | C3645H5745N1031O1127S41 |
| Total Number of Atoms: | 11589 |
| Total number of positively charged residues (ARG + LYS): | 86 |
| Total number of negatively charged residues (ASP + GLU): | 91 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67530 Absorption 0.1% (=1 g/l) 0.810, assuming all pairs of CYS residues form cystines Ext. coefficient 65780 Absorption 0.1% (=1 g/l) 0.789, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.14 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.88, 26.34, 20.32] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.6069 |
| Grand average of hydropathicity (GRAVY): | -0.36 |