Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4426 |
| Number of amino acids: | 623 |
| Molecular Weight: | 68896.15 Da |
| Theoretical pI: | 5.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 6.9% |
| Cysteine CYS (C) | 35 | 5.62% |
| Glutamic Acid GLU (E) | 37 | 5.94% |
| Aspartic Acid ASP (D) | 47 | 7.54% |
| Glycine GLY (G) | 53 | 8.51% |
| Phynylalanine PHE (F) | 23 | 3.69% |
| Isoleucine ILE (I) | 33 | 5.3% |
| Histidine HIS (H) | 10 | 1.61% |
| Lysine LYS (K) | 52 | 8.35% |
| Methionine MET (M) | 12 | 1.93% |
| Leucine LEU (L) | 40 | 6.42% |
| Asparagine ASN (N) | 32 | 5.14% |
| Glutamine GLN (Q) | 22 | 3.53% |
| Proline PRO (P) | 23 | 3.69% |
| Serine SER (S) | 39 | 6.26% |
| Arginine ARG (R) | 20 | 3.21% |
| Threonine THR (T) | 31 | 4.98% |
| Tryptophan TRP (W) | 13 | 2.09% |
| Valine VAL (V) | 39 | 6.26% |
| Tyrosine TYR (Y) | 19 | 3.05% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3013 |
| Hydrogen | H | 4690 |
| Nitrogen | N | 822 |
| Oxygen | O | 935 |
| Sulphur | S | 47 |
| Formula | C3013H4690N822O935S47 |
| Total Number of Atoms: | 9507 |
| Total number of positively charged residues (ARG + LYS): | 72 |
| Total number of negatively charged residues (ASP + GLU): | 84 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 101935 Absorption 0.1% (=1 g/l) 1.480, assuming all pairs of CYS residues form cystines Ext. coefficient 99810 Absorption 0.1% (=1 g/l) 1.449, assuming all CYS residues are reduced |
| Aromaticity: | 0.088 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.81, 23.60, 21.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.7544 |
| Grand average of hydropathicity (GRAVY): | -0.38 |