Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4423 |
| Number of amino acids: | 622 |
| Molecular Weight: | 69209.68 Da |
| Theoretical pI: | 5.56 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 6.27% |
| Cysteine CYS (C) | 34 | 5.47% |
| Glutamic Acid GLU (E) | 44 | 7.07% |
| Aspartic Acid ASP (D) | 36 | 5.79% |
| Glycine GLY (G) | 54 | 8.68% |
| Phynylalanine PHE (F) | 26 | 4.18% |
| Isoleucine ILE (I) | 32 | 5.14% |
| Histidine HIS (H) | 8 | 1.29% |
| Lysine LYS (K) | 45 | 7.23% |
| Methionine MET (M) | 13 | 2.09% |
| Leucine LEU (L) | 42 | 6.75% |
| Asparagine ASN (N) | 32 | 5.14% |
| Glutamine GLN (Q) | 24 | 3.86% |
| Proline PRO (P) | 26 | 4.18% |
| Serine SER (S) | 40 | 6.43% |
| Arginine ARG (R) | 25 | 4.02% |
| Threonine THR (T) | 28 | 4.5% |
| Tryptophan TRP (W) | 11 | 1.77% |
| Valine VAL (V) | 40 | 6.43% |
| Tyrosine TYR (Y) | 23 | 3.7% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3040 |
| Hydrogen | H | 4717 |
| Nitrogen | N | 825 |
| Oxygen | O | 930 |
| Sulphur | S | 47 |
| Formula | C3040H4717N825O930S47 |
| Total Number of Atoms: | 9559 |
| Total number of positively charged residues (ARG + LYS): | 70 |
| Total number of negatively charged residues (ASP + GLU): | 80 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 96895 Absorption 0.1% (=1 g/l) 1.400, assuming all pairs of CYS residues form cystines Ext. coefficient 94770 Absorption 0.1% (=1 g/l) 1.369, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.88 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.97, 24.44, 22.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.3183 |
| Grand average of hydropathicity (GRAVY): | -0.35 |