Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4421 |
| Number of amino acids: | 727 |
| Molecular Weight: | 81998.87 Da |
| Theoretical pI: | 8.65 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 5.91% |
| Cysteine CYS (C) | 11 | 1.51% |
| Glutamic Acid GLU (E) | 36 | 4.95% |
| Aspartic Acid ASP (D) | 31 | 4.26% |
| Glycine GLY (G) | 64 | 8.8% |
| Phynylalanine PHE (F) | 36 | 4.95% |
| Isoleucine ILE (I) | 45 | 6.19% |
| Histidine HIS (H) | 17 | 2.34% |
| Lysine LYS (K) | 52 | 7.15% |
| Methionine MET (M) | 21 | 2.89% |
| Leucine LEU (L) | 56 | 7.7% |
| Asparagine ASN (N) | 35 | 4.81% |
| Glutamine GLN (Q) | 16 | 2.2% |
| Proline PRO (P) | 40 | 5.5% |
| Serine SER (S) | 55 | 7.57% |
| Arginine ARG (R) | 23 | 3.16% |
| Threonine THR (T) | 46 | 6.33% |
| Tryptophan TRP (W) | 26 | 3.58% |
| Valine VAL (V) | 38 | 5.23% |
| Tyrosine TYR (Y) | 36 | 4.95% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3750 |
| Hydrogen | H | 5655 |
| Nitrogen | N | 959 |
| Oxygen | O | 1050 |
| Sulphur | S | 32 |
| Formula | C3750H5655N959O1050S32 |
| Total Number of Atoms: | 11446 |
| Total number of positively charged residues (ARG + LYS): | 75 |
| Total number of negatively charged residues (ASP + GLU): | 67 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 197265 Absorption 0.1% (=1 g/l) 2.406, assuming all pairs of CYS residues form cystines Ext. coefficient 196640 Absorption 0.1% (=1 g/l) 2.398, assuming all CYS residues are reduced |
| Aromaticity: | 0.135 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.70 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.60, 26.68, 21.46] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.2545 |
| Grand average of hydropathicity (GRAVY): | -0.26 |