Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4420 |
| Number of amino acids: | 841 |
| Molecular Weight: | 92172.3 Da |
| Theoretical pI: | 5.89 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 66 | 7.85% |
| Cysteine CYS (C) | 22 | 2.62% |
| Glutamic Acid GLU (E) | 46 | 5.47% |
| Aspartic Acid ASP (D) | 34 | 4.04% |
| Glycine GLY (G) | 89 | 10.58% |
| Phynylalanine PHE (F) | 35 | 4.16% |
| Isoleucine ILE (I) | 35 | 4.16% |
| Histidine HIS (H) | 18 | 2.14% |
| Lysine LYS (K) | 39 | 4.64% |
| Methionine MET (M) | 20 | 2.38% |
| Leucine LEU (L) | 59 | 7.02% |
| Asparagine ASN (N) | 40 | 4.76% |
| Glutamine GLN (Q) | 36 | 4.28% |
| Proline PRO (P) | 44 | 5.23% |
| Serine SER (S) | 58 | 6.9% |
| Arginine ARG (R) | 29 | 3.45% |
| Threonine THR (T) | 48 | 5.71% |
| Tryptophan TRP (W) | 23 | 2.73% |
| Valine VAL (V) | 64 | 7.61% |
| Tyrosine TYR (Y) | 36 | 4.28% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4126 |
| Hydrogen | H | 6264 |
| Nitrogen | N | 1102 |
| Oxygen | O | 1220 |
| Sulphur | S | 42 |
| Formula | C4126H6264N1102O1220S42 |
| Total Number of Atoms: | 12754 |
| Total number of positively charged residues (ARG + LYS): | 68 |
| Total number of negatively charged residues (ASP + GLU): | 80 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 181515 Absorption 0.1% (=1 g/l) 1.969, assuming all pairs of CYS residues form cystines Ext. coefficient 180140 Absorption 0.1% (=1 g/l) 1.954, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.49 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.96, 27.47, 22.71] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.5077 |
| Grand average of hydropathicity (GRAVY): | -0.21 |