Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4417 |
| Number of amino acids: | 626 |
| Molecular Weight: | 68060.4 Da |
| Theoretical pI: | 8.5 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 45 | 7.19% |
| Cysteine CYS (C) | 8 | 1.28% |
| Glutamic Acid GLU (E) | 29 | 4.63% |
| Aspartic Acid ASP (D) | 32 | 5.11% |
| Glycine GLY (G) | 64 | 10.22% |
| Phynylalanine PHE (F) | 45 | 7.19% |
| Isoleucine ILE (I) | 22 | 3.51% |
| Histidine HIS (H) | 10 | 1.6% |
| Lysine LYS (K) | 44 | 7.03% |
| Methionine MET (M) | 7 | 1.12% |
| Leucine LEU (L) | 29 | 4.63% |
| Asparagine ASN (N) | 54 | 8.63% |
| Glutamine GLN (Q) | 10 | 1.6% |
| Proline PRO (P) | 24 | 3.83% |
| Serine SER (S) | 65 | 10.38% |
| Arginine ARG (R) | 22 | 3.51% |
| Threonine THR (T) | 42 | 6.71% |
| Tryptophan TRP (W) | 5 | 0.8% |
| Valine VAL (V) | 42 | 6.71% |
| Tyrosine TYR (Y) | 27 | 4.31% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3019 |
| Hydrogen | H | 4575 |
| Nitrogen | N | 825 |
| Oxygen | O | 947 |
| Sulphur | S | 15 |
| Formula | C3019H4575N825O947S15 |
| Total Number of Atoms: | 9381 |
| Total number of positively charged residues (ARG + LYS): | 66 |
| Total number of negatively charged residues (ASP + GLU): | 61 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 68230 Absorption 0.1% (=1 g/l) 1.002, assuming all pairs of CYS residues form cystines Ext. coefficient 67730 Absorption 0.1% (=1 g/l) 0.995, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.59 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.16, 33.07, 17.57] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 58.4186 |
| Grand average of hydropathicity (GRAVY): | -0.48 |