Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4415 |
| Number of amino acids: | 642 |
| Molecular Weight: | 72029.21 Da |
| Theoretical pI: | 5.6 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 6.54% |
| Cysteine CYS (C) | 4 | 0.62% |
| Glutamic Acid GLU (E) | 30 | 4.67% |
| Aspartic Acid ASP (D) | 44 | 6.85% |
| Glycine GLY (G) | 46 | 7.17% |
| Phynylalanine PHE (F) | 27 | 4.21% |
| Isoleucine ILE (I) | 30 | 4.67% |
| Histidine HIS (H) | 14 | 2.18% |
| Lysine LYS (K) | 33 | 5.14% |
| Methionine MET (M) | 10 | 1.56% |
| Leucine LEU (L) | 59 | 9.19% |
| Asparagine ASN (N) | 33 | 5.14% |
| Glutamine GLN (Q) | 20 | 3.12% |
| Proline PRO (P) | 31 | 4.83% |
| Serine SER (S) | 55 | 8.57% |
| Arginine ARG (R) | 28 | 4.36% |
| Threonine THR (T) | 37 | 5.76% |
| Tryptophan TRP (W) | 18 | 2.8% |
| Valine VAL (V) | 51 | 7.94% |
| Tyrosine TYR (Y) | 30 | 4.67% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3256 |
| Hydrogen | H | 4960 |
| Nitrogen | N | 858 |
| Oxygen | O | 966 |
| Sulphur | S | 14 |
| Formula | C3256H4960N858O966S14 |
| Total Number of Atoms: | 10054 |
| Total number of positively charged residues (ARG + LYS): | 61 |
| Total number of negatively charged residues (ASP + GLU): | 74 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 143950 Absorption 0.1% (=1 g/l) 1.998, assuming all pairs of CYS residues form cystines Ext. coefficient 143700 Absorption 0.1% (=1 g/l) 1.995, assuming all CYS residues are reduced |
| Aromaticity: | 0.117 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.13 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.49, 25.70, 21.96] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.6449 |
| Grand average of hydropathicity (GRAVY): | -0.29 |