Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4414 |
| Number of amino acids: | 276 |
| Molecular Weight: | 30133.24 Da |
| Theoretical pI: | 7.7 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 6.88% |
| Cysteine CYS (C) | 11 | 3.99% |
| Glutamic Acid GLU (E) | 14 | 5.07% |
| Aspartic Acid ASP (D) | 13 | 4.71% |
| Glycine GLY (G) | 30 | 10.87% |
| Phynylalanine PHE (F) | 10 | 3.62% |
| Isoleucine ILE (I) | 10 | 3.62% |
| Histidine HIS (H) | 10 | 3.62% |
| Lysine LYS (K) | 15 | 5.43% |
| Methionine MET (M) | 7 | 2.54% |
| Leucine LEU (L) | 22 | 7.97% |
| Asparagine ASN (N) | 11 | 3.99% |
| Glutamine GLN (Q) | 9 | 3.26% |
| Proline PRO (P) | 16 | 5.8% |
| Serine SER (S) | 25 | 9.06% |
| Arginine ARG (R) | 13 | 4.71% |
| Threonine THR (T) | 9 | 3.26% |
| Tryptophan TRP (W) | 7 | 2.54% |
| Valine VAL (V) | 18 | 6.52% |
| Tyrosine TYR (Y) | 7 | 2.54% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1327 |
| Hydrogen | H | 2049 |
| Nitrogen | N | 377 |
| Oxygen | O | 392 |
| Sulphur | S | 18 |
| Formula | C1327H2049N377O392S18 |
| Total Number of Atoms: | 4163 |
| Total number of positively charged residues (ARG + LYS): | 28 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49555 Absorption 0.1% (=1 g/l) 1.645, assuming all pairs of CYS residues form cystines Ext. coefficient 48930 Absorption 0.1% (=1 g/l) 1.624, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.92 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.81, 29.71, 22.46] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.0145 |
| Grand average of hydropathicity (GRAVY): | -0.31 |