Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4405 |
| Number of amino acids: | 351 |
| Molecular Weight: | 39261.56 Da |
| Theoretical pI: | 5.81 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 8.55% |
| Cysteine CYS (C) | 2 | 0.57% |
| Glutamic Acid GLU (E) | 20 | 5.7% |
| Aspartic Acid ASP (D) | 11 | 3.13% |
| Glycine GLY (G) | 24 | 6.84% |
| Phynylalanine PHE (F) | 17 | 4.84% |
| Isoleucine ILE (I) | 30 | 8.55% |
| Histidine HIS (H) | 5 | 1.42% |
| Lysine LYS (K) | 18 | 5.13% |
| Methionine MET (M) | 6 | 1.71% |
| Leucine LEU (L) | 33 | 9.4% |
| Asparagine ASN (N) | 36 | 10.26% |
| Glutamine GLN (Q) | 14 | 3.99% |
| Proline PRO (P) | 16 | 4.56% |
| Serine SER (S) | 23 | 6.55% |
| Arginine ARG (R) | 9 | 2.56% |
| Threonine THR (T) | 14 | 3.99% |
| Tryptophan TRP (W) | 3 | 0.85% |
| Valine VAL (V) | 17 | 4.84% |
| Tyrosine TYR (Y) | 23 | 6.55% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1785 |
| Hydrogen | H | 2731 |
| Nitrogen | N | 459 |
| Oxygen | O | 524 |
| Sulphur | S | 8 |
| Formula | C1785H2731N459O524S8 |
| Total Number of Atoms: | 5507 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 31 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 50895 Absorption 0.1% (=1 g/l) 1.296, assuming all pairs of CYS residues form cystines Ext. coefficient 50770 Absorption 0.1% (=1 g/l) 1.293, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.22 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.04, 28.21, 25.36] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.5926 |
| Grand average of hydropathicity (GRAVY): | -0.16 |