Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4399 |
| Number of amino acids: | 793 |
| Molecular Weight: | 88754.1 Da |
| Theoretical pI: | 5.82 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 4.92% |
| Cysteine CYS (C) | 31 | 3.91% |
| Glutamic Acid GLU (E) | 68 | 8.58% |
| Aspartic Acid ASP (D) | 36 | 4.54% |
| Glycine GLY (G) | 55 | 6.94% |
| Phynylalanine PHE (F) | 32 | 4.04% |
| Isoleucine ILE (I) | 51 | 6.43% |
| Histidine HIS (H) | 13 | 1.64% |
| Lysine LYS (K) | 52 | 6.56% |
| Methionine MET (M) | 15 | 1.89% |
| Leucine LEU (L) | 63 | 7.94% |
| Asparagine ASN (N) | 39 | 4.92% |
| Glutamine GLN (Q) | 19 | 2.4% |
| Proline PRO (P) | 25 | 3.15% |
| Serine SER (S) | 68 | 8.58% |
| Arginine ARG (R) | 41 | 5.17% |
| Threonine THR (T) | 52 | 6.56% |
| Tryptophan TRP (W) | 7 | 0.88% |
| Valine VAL (V) | 58 | 7.31% |
| Tyrosine TYR (Y) | 29 | 3.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3903 |
| Hydrogen | H | 6175 |
| Nitrogen | N | 1059 |
| Oxygen | O | 1209 |
| Sulphur | S | 46 |
| Formula | C3903H6175N1059O1209S46 |
| Total Number of Atoms: | 12392 |
| Total number of positively charged residues (ARG + LYS): | 93 |
| Total number of negatively charged residues (ASP + GLU): | 104 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 83585 Absorption 0.1% (=1 g/l) 0.942, assuming all pairs of CYS residues form cystines Ext. coefficient 81710 Absorption 0.1% (=1 g/l) 0.921, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.23 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.26, 23.58, 23.33] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.1942 |
| Grand average of hydropathicity (GRAVY): | -0.27 |