Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4398 |
| Number of amino acids: | 665 |
| Molecular Weight: | 74355.31 Da |
| Theoretical pI: | 8.47 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 4.66% |
| Cysteine CYS (C) | 15 | 2.26% |
| Glutamic Acid GLU (E) | 35 | 5.26% |
| Aspartic Acid ASP (D) | 33 | 4.96% |
| Glycine GLY (G) | 42 | 6.32% |
| Phynylalanine PHE (F) | 33 | 4.96% |
| Isoleucine ILE (I) | 43 | 6.47% |
| Histidine HIS (H) | 12 | 1.8% |
| Lysine LYS (K) | 39 | 5.86% |
| Methionine MET (M) | 18 | 2.71% |
| Leucine LEU (L) | 67 | 10.08% |
| Asparagine ASN (N) | 39 | 5.86% |
| Glutamine GLN (Q) | 20 | 3.01% |
| Proline PRO (P) | 26 | 3.91% |
| Serine SER (S) | 71 | 10.68% |
| Arginine ARG (R) | 35 | 5.26% |
| Threonine THR (T) | 33 | 4.96% |
| Tryptophan TRP (W) | 6 | 0.9% |
| Valine VAL (V) | 47 | 7.07% |
| Tyrosine TYR (Y) | 20 | 3.01% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3304 |
| Hydrogen | H | 5234 |
| Nitrogen | N | 898 |
| Oxygen | O | 985 |
| Sulphur | S | 33 |
| Formula | C3304H5234N898O985S33 |
| Total Number of Atoms: | 10454 |
| Total number of positively charged residues (ARG + LYS): | 74 |
| Total number of negatively charged residues (ASP + GLU): | 68 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 63675 Absorption 0.1% (=1 g/l) 0.856, assuming all pairs of CYS residues form cystines Ext. coefficient 62800 Absorption 0.1% (=1 g/l) 0.845, assuming all CYS residues are reduced |
| Aromaticity: | 0.089 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.64 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.48, 26.77, 22.71] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.6692 |
| Grand average of hydropathicity (GRAVY): | -0.15 |