Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4393 |
| Number of amino acids: | 669 |
| Molecular Weight: | 73629.3 Da |
| Theoretical pI: | 5.08 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 52 | 7.77% |
| Cysteine CYS (C) | 5 | 0.75% |
| Glutamic Acid GLU (E) | 67 | 10.01% |
| Aspartic Acid ASP (D) | 47 | 7.03% |
| Glycine GLY (G) | 57 | 8.52% |
| Phynylalanine PHE (F) | 25 | 3.74% |
| Isoleucine ILE (I) | 45 | 6.73% |
| Histidine HIS (H) | 6 | 0.9% |
| Lysine LYS (K) | 65 | 9.72% |
| Methionine MET (M) | 9 | 1.35% |
| Leucine LEU (L) | 49 | 7.32% |
| Asparagine ASN (N) | 30 | 4.48% |
| Glutamine GLN (Q) | 25 | 3.74% |
| Proline PRO (P) | 21 | 3.14% |
| Serine SER (S) | 31 | 4.63% |
| Arginine ARG (R) | 27 | 4.04% |
| Threonine THR (T) | 39 | 5.83% |
| Tryptophan TRP (W) | 2 | 0.3% |
| Valine VAL (V) | 53 | 7.92% |
| Tyrosine TYR (Y) | 14 | 2.09% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3242 |
| Hydrogen | H | 5226 |
| Nitrogen | N | 884 |
| Oxygen | O | 1037 |
| Sulphur | S | 14 |
| Formula | C3242H5226N884O1037S14 |
| Total Number of Atoms: | 10403 |
| Total number of positively charged residues (ARG + LYS): | 92 |
| Total number of negatively charged residues (ASP + GLU): | 114 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 32110 Absorption 0.1% (=1 g/l) 0.436, assuming all pairs of CYS residues form cystines Ext. coefficient 31860 Absorption 0.1% (=1 g/l) 0.433, assuming all CYS residues are reduced |
| Aromaticity: | 0.061 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.67 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.10, 20.78, 26.46] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.5456 |
| Grand average of hydropathicity (GRAVY): | -0.46 |