Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4391 |
| Number of amino acids: | 363 |
| Molecular Weight: | 38674.55 Da |
| Theoretical pI: | 4.75 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 11.57% |
| Cysteine CYS (C) | 10 | 2.75% |
| Glutamic Acid GLU (E) | 8 | 2.2% |
| Aspartic Acid ASP (D) | 27 | 7.44% |
| Glycine GLY (G) | 25 | 6.89% |
| Phynylalanine PHE (F) | 17 | 4.68% |
| Isoleucine ILE (I) | 17 | 4.68% |
| Histidine HIS (H) | 5 | 1.38% |
| Lysine LYS (K) | 8 | 2.2% |
| Methionine MET (M) | 10 | 2.75% |
| Leucine LEU (L) | 34 | 9.37% |
| Asparagine ASN (N) | 26 | 7.16% |
| Glutamine GLN (Q) | 17 | 4.68% |
| Proline PRO (P) | 12 | 3.31% |
| Serine SER (S) | 30 | 8.26% |
| Arginine ARG (R) | 15 | 4.13% |
| Threonine THR (T) | 26 | 7.16% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 26 | 7.16% |
| Tyrosine TYR (Y) | 8 | 2.2% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1676 |
| Hydrogen | H | 2657 |
| Nitrogen | N | 469 |
| Oxygen | O | 541 |
| Sulphur | S | 20 |
| Formula | C1676H2657N469O541S20 |
| Total Number of Atoms: | 5363 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 35 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 12545 Absorption 0.1% (=1 g/l) 0.324, assuming all pairs of CYS residues form cystines Ext. coefficient 11920 Absorption 0.1% (=1 g/l) 0.308, assuming all CYS residues are reduced |
| Aromaticity: | 0.069 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.27 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.10, 25.62, 25.90] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.1349 |
| Grand average of hydropathicity (GRAVY): | 0.04 |