Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4390 |
| Number of amino acids: | 642 |
| Molecular Weight: | 71935.16 Da |
| Theoretical pI: | 6.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 4.67% |
| Cysteine CYS (C) | 14 | 2.18% |
| Glutamic Acid GLU (E) | 36 | 5.61% |
| Aspartic Acid ASP (D) | 35 | 5.45% |
| Glycine GLY (G) | 42 | 6.54% |
| Phynylalanine PHE (F) | 42 | 6.54% |
| Isoleucine ILE (I) | 41 | 6.39% |
| Histidine HIS (H) | 10 | 1.56% |
| Lysine LYS (K) | 38 | 5.92% |
| Methionine MET (M) | 13 | 2.02% |
| Leucine LEU (L) | 63 | 9.81% |
| Asparagine ASN (N) | 31 | 4.83% |
| Glutamine GLN (Q) | 23 | 3.58% |
| Proline PRO (P) | 25 | 3.89% |
| Serine SER (S) | 62 | 9.66% |
| Arginine ARG (R) | 29 | 4.52% |
| Threonine THR (T) | 43 | 6.7% |
| Tryptophan TRP (W) | 6 | 0.93% |
| Valine VAL (V) | 40 | 6.23% |
| Tyrosine TYR (Y) | 19 | 2.96% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3224 |
| Hydrogen | H | 5035 |
| Nitrogen | N | 847 |
| Oxygen | O | 963 |
| Sulphur | S | 27 |
| Formula | C3224H5035N847O963S27 |
| Total Number of Atoms: | 10096 |
| Total number of positively charged residues (ARG + LYS): | 67 |
| Total number of negatively charged residues (ASP + GLU): | 71 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 62185 Absorption 0.1% (=1 g/l) 0.864, assuming all pairs of CYS residues form cystines Ext. coefficient 61310 Absorption 0.1% (=1 g/l) 0.852, assuming all CYS residues are reduced |
| Aromaticity: | 0.104 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.33 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.87, 24.92, 22.12] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.919 |
| Grand average of hydropathicity (GRAVY): | -0.14 |