Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4388 |
| Number of amino acids: | 442 |
| Molecular Weight: | 48014.64 Da |
| Theoretical pI: | 5.75 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 8.6% |
| Cysteine CYS (C) | 3 | 0.68% |
| Glutamic Acid GLU (E) | 34 | 7.69% |
| Aspartic Acid ASP (D) | 21 | 4.75% |
| Glycine GLY (G) | 44 | 9.95% |
| Phynylalanine PHE (F) | 28 | 6.33% |
| Isoleucine ILE (I) | 17 | 3.85% |
| Histidine HIS (H) | 19 | 4.3% |
| Lysine LYS (K) | 29 | 6.56% |
| Methionine MET (M) | 11 | 2.49% |
| Leucine LEU (L) | 40 | 9.05% |
| Asparagine ASN (N) | 9 | 2.04% |
| Glutamine GLN (Q) | 13 | 2.94% |
| Proline PRO (P) | 21 | 4.75% |
| Serine SER (S) | 35 | 7.92% |
| Arginine ARG (R) | 12 | 2.71% |
| Threonine THR (T) | 18 | 4.07% |
| Tryptophan TRP (W) | 3 | 0.68% |
| Valine VAL (V) | 37 | 8.37% |
| Tyrosine TYR (Y) | 10 | 2.26% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2165 |
| Hydrogen | H | 3344 |
| Nitrogen | N | 570 |
| Oxygen | O | 638 |
| Sulphur | S | 14 |
| Formula | C2165H3344N570O638S14 |
| Total Number of Atoms: | 6731 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 55 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31525 Absorption 0.1% (=1 g/l) 0.657, assuming all pairs of CYS residues form cystines Ext. coefficient 31400 Absorption 0.1% (=1 g/l) 0.654, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.61 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.54, 24.66, 27.83] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.1674 |
| Grand average of hydropathicity (GRAVY): | -0.10 |