Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4387 |
| Number of amino acids: | 507 |
| Molecular Weight: | 57089.45 Da |
| Theoretical pI: | 4.84 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 6.71% |
| Cysteine CYS (C) | 6 | 1.18% |
| Glutamic Acid GLU (E) | 50 | 9.86% |
| Aspartic Acid ASP (D) | 35 | 6.9% |
| Glycine GLY (G) | 24 | 4.73% |
| Phynylalanine PHE (F) | 40 | 7.89% |
| Isoleucine ILE (I) | 26 | 5.13% |
| Histidine HIS (H) | 8 | 1.58% |
| Lysine LYS (K) | 46 | 9.07% |
| Methionine MET (M) | 3 | 0.59% |
| Leucine LEU (L) | 41 | 8.09% |
| Asparagine ASN (N) | 25 | 4.93% |
| Glutamine GLN (Q) | 10 | 1.97% |
| Proline PRO (P) | 27 | 5.33% |
| Serine SER (S) | 43 | 8.48% |
| Arginine ARG (R) | 12 | 2.37% |
| Threonine THR (T) | 17 | 3.35% |
| Tryptophan TRP (W) | 3 | 0.59% |
| Valine VAL (V) | 41 | 8.09% |
| Tyrosine TYR (Y) | 16 | 3.16% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2595 |
| Hydrogen | H | 3971 |
| Nitrogen | N | 643 |
| Oxygen | O | 789 |
| Sulphur | S | 9 |
| Formula | C2595H3971N643O789S9 |
| Total Number of Atoms: | 8007 |
| Total number of positively charged residues (ARG + LYS): | 58 |
| Total number of negatively charged residues (ASP + GLU): | 85 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40715 Absorption 0.1% (=1 g/l) 0.713, assuming all pairs of CYS residues form cystines Ext. coefficient 40340 Absorption 0.1% (=1 g/l) 0.707, assuming all CYS residues are reduced |
| Aromaticity: | 0.116 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.24 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.94, 23.47, 25.25] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.6963 |
| Grand average of hydropathicity (GRAVY): | -0.32 |