Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4385 |
| Number of amino acids: | 659 |
| Molecular Weight: | 73924.98 Da |
| Theoretical pI: | 8.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 6.37% |
| Cysteine CYS (C) | 14 | 2.12% |
| Glutamic Acid GLU (E) | 27 | 4.1% |
| Aspartic Acid ASP (D) | 36 | 5.46% |
| Glycine GLY (G) | 34 | 5.16% |
| Phynylalanine PHE (F) | 38 | 5.77% |
| Isoleucine ILE (I) | 41 | 6.22% |
| Histidine HIS (H) | 8 | 1.21% |
| Lysine LYS (K) | 26 | 3.95% |
| Methionine MET (M) | 14 | 2.12% |
| Leucine LEU (L) | 57 | 8.65% |
| Asparagine ASN (N) | 44 | 6.68% |
| Glutamine GLN (Q) | 27 | 4.1% |
| Proline PRO (P) | 31 | 4.7% |
| Serine SER (S) | 60 | 9.1% |
| Arginine ARG (R) | 41 | 6.22% |
| Threonine THR (T) | 48 | 7.28% |
| Tryptophan TRP (W) | 4 | 0.61% |
| Valine VAL (V) | 42 | 6.37% |
| Tyrosine TYR (Y) | 25 | 3.79% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3282 |
| Hydrogen | H | 5135 |
| Nitrogen | N | 899 |
| Oxygen | O | 990 |
| Sulphur | S | 28 |
| Formula | C3282H5135N899O990S28 |
| Total Number of Atoms: | 10334 |
| Total number of positively charged residues (ARG + LYS): | 67 |
| Total number of negatively charged residues (ASP + GLU): | 63 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 60125 Absorption 0.1% (=1 g/l) 0.813, assuming all pairs of CYS residues form cystines Ext. coefficient 59250 Absorption 0.1% (=1 g/l) 0.801, assuming all CYS residues are reduced |
| Aromaticity: | 0.102 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.80 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.41, 25.64, 21.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.8528 |
| Grand average of hydropathicity (GRAVY): | -0.21 |