Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4384 |
| Number of amino acids: | 420 |
| Molecular Weight: | 47327.74 Da |
| Theoretical pI: | 4.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 7.86% |
| Cysteine CYS (C) | 2 | 0.48% |
| Glutamic Acid GLU (E) | 42 | 10% |
| Aspartic Acid ASP (D) | 51 | 12.14% |
| Glycine GLY (G) | 29 | 6.9% |
| Phynylalanine PHE (F) | 15 | 3.57% |
| Isoleucine ILE (I) | 22 | 5.24% |
| Histidine HIS (H) | 6 | 1.43% |
| Lysine LYS (K) | 53 | 12.62% |
| Methionine MET (M) | 8 | 1.9% |
| Leucine LEU (L) | 19 | 4.52% |
| Asparagine ASN (N) | 8 | 1.9% |
| Glutamine GLN (Q) | 7 | 1.67% |
| Proline PRO (P) | 27 | 6.43% |
| Serine SER (S) | 20 | 4.76% |
| Arginine ARG (R) | 3 | 0.71% |
| Threonine THR (T) | 21 | 5% |
| Tryptophan TRP (W) | 14 | 3.33% |
| Valine VAL (V) | 25 | 5.95% |
| Tyrosine TYR (Y) | 15 | 3.57% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2130 |
| Hydrogen | H | 3225 |
| Nitrogen | N | 523 |
| Oxygen | O | 678 |
| Sulphur | S | 10 |
| Formula | C2130H3225N523O678S10 |
| Total Number of Atoms: | 6566 |
| Total number of positively charged residues (ARG + LYS): | 56 |
| Total number of negatively charged residues (ASP + GLU): | 93 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 99475 Absorption 0.1% (=1 g/l) 2.102, assuming all pairs of CYS residues form cystines Ext. coefficient 99350 Absorption 0.1% (=1 g/l) 2.099, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 26.10 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.19, 20.00, 24.29] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.1905 |
| Grand average of hydropathicity (GRAVY): | -0.80 |