Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4383 |
| Number of amino acids: | 425 |
| Molecular Weight: | 48527.35 Da |
| Theoretical pI: | 4.46 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 7.29% |
| Cysteine CYS (C) | 3 | 0.71% |
| Glutamic Acid GLU (E) | 52 | 12.24% |
| Aspartic Acid ASP (D) | 51 | 12% |
| Glycine GLY (G) | 22 | 5.18% |
| Phynylalanine PHE (F) | 16 | 3.76% |
| Isoleucine ILE (I) | 19 | 4.47% |
| Histidine HIS (H) | 7 | 1.65% |
| Lysine LYS (K) | 52 | 12.24% |
| Methionine MET (M) | 4 | 0.94% |
| Leucine LEU (L) | 23 | 5.41% |
| Asparagine ASN (N) | 15 | 3.53% |
| Glutamine GLN (Q) | 7 | 1.65% |
| Proline PRO (P) | 26 | 6.12% |
| Serine SER (S) | 23 | 5.41% |
| Arginine ARG (R) | 4 | 0.94% |
| Threonine THR (T) | 22 | 5.18% |
| Tryptophan TRP (W) | 13 | 3.06% |
| Valine VAL (V) | 19 | 4.47% |
| Tyrosine TYR (Y) | 16 | 3.76% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2168 |
| Hydrogen | H | 3262 |
| Nitrogen | N | 538 |
| Oxygen | O | 715 |
| Sulphur | S | 7 |
| Formula | C2168H3262N538O715S7 |
| Total Number of Atoms: | 6690 |
| Total number of positively charged residues (ARG + LYS): | 56 |
| Total number of negatively charged residues (ASP + GLU): | 103 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 95465 Absorption 0.1% (=1 g/l) 1.967, assuming all pairs of CYS residues form cystines Ext. coefficient 95340 Absorption 0.1% (=1 g/l) 1.965, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.57 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.94, 20.24, 25.88] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 58.8 |
| Grand average of hydropathicity (GRAVY): | -1.01 |