Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4381 |
| Number of amino acids: | 512 |
| Molecular Weight: | 57087.4 Da |
| Theoretical pI: | 4.98 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 8.01% |
| Cysteine CYS (C) | 4 | 0.78% |
| Glutamic Acid GLU (E) | 47 | 9.18% |
| Aspartic Acid ASP (D) | 33 | 6.45% |
| Glycine GLY (G) | 28 | 5.47% |
| Phynylalanine PHE (F) | 38 | 7.42% |
| Isoleucine ILE (I) | 25 | 4.88% |
| Histidine HIS (H) | 12 | 2.34% |
| Lysine LYS (K) | 49 | 9.57% |
| Methionine MET (M) | 2 | 0.39% |
| Leucine LEU (L) | 36 | 7.03% |
| Asparagine ASN (N) | 25 | 4.88% |
| Glutamine GLN (Q) | 20 | 3.91% |
| Proline PRO (P) | 30 | 5.86% |
| Serine SER (S) | 31 | 6.05% |
| Arginine ARG (R) | 6 | 1.17% |
| Threonine THR (T) | 23 | 4.49% |
| Tryptophan TRP (W) | 3 | 0.59% |
| Valine VAL (V) | 45 | 8.79% |
| Tyrosine TYR (Y) | 14 | 2.73% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2597 |
| Hydrogen | H | 3977 |
| Nitrogen | N | 651 |
| Oxygen | O | 786 |
| Sulphur | S | 6 |
| Formula | C2597H3977N651O786S6 |
| Total Number of Atoms: | 8017 |
| Total number of positively charged residues (ARG + LYS): | 55 |
| Total number of negatively charged residues (ASP + GLU): | 80 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 37610 Absorption 0.1% (=1 g/l) 0.659, assuming all pairs of CYS residues form cystines Ext. coefficient 37360 Absorption 0.1% (=1 g/l) 0.654, assuming all CYS residues are reduced |
| Aromaticity: | 0.107 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.62 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.45, 22.27, 24.61] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.9609 |
| Grand average of hydropathicity (GRAVY): | -0.36 |