Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4371 |
| Number of amino acids: | 323 |
| Molecular Weight: | 35831.96 Da |
| Theoretical pI: | 9.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 8.36% |
| Cysteine CYS (C) | 8 | 2.48% |
| Glutamic Acid GLU (E) | 6 | 1.86% |
| Aspartic Acid ASP (D) | 21 | 6.5% |
| Glycine GLY (G) | 17 | 5.26% |
| Phynylalanine PHE (F) | 23 | 7.12% |
| Isoleucine ILE (I) | 16 | 4.95% |
| Histidine HIS (H) | 6 | 1.86% |
| Lysine LYS (K) | 16 | 4.95% |
| Methionine MET (M) | 6 | 1.86% |
| Leucine LEU (L) | 28 | 8.67% |
| Asparagine ASN (N) | 17 | 5.26% |
| Glutamine GLN (Q) | 16 | 4.95% |
| Proline PRO (P) | 15 | 4.64% |
| Serine SER (S) | 30 | 9.29% |
| Arginine ARG (R) | 25 | 7.74% |
| Threonine THR (T) | 20 | 6.19% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 21 | 6.5% |
| Tyrosine TYR (Y) | 5 | 1.55% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1579 |
| Hydrogen | H | 2513 |
| Nitrogen | N | 459 |
| Oxygen | O | 466 |
| Sulphur | S | 14 |
| Formula | C1579H2513N459O466S14 |
| Total Number of Atoms: | 5031 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 7950 Absorption 0.1% (=1 g/l) 0.222, assuming all pairs of CYS residues form cystines Ext. coefficient 7450 Absorption 0.1% (=1 g/l) 0.208, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.10 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.79, 24.46, 20.74] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.3406 |
| Grand average of hydropathicity (GRAVY): | -0.21 |