Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4369 |
| Number of amino acids: | 488 |
| Molecular Weight: | 53758.09 Da |
| Theoretical pI: | 6.92 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 6.76% |
| Cysteine CYS (C) | 5 | 1.02% |
| Glutamic Acid GLU (E) | 23 | 4.71% |
| Aspartic Acid ASP (D) | 20 | 4.1% |
| Glycine GLY (G) | 47 | 9.63% |
| Phynylalanine PHE (F) | 22 | 4.51% |
| Isoleucine ILE (I) | 22 | 4.51% |
| Histidine HIS (H) | 11 | 2.25% |
| Lysine LYS (K) | 12 | 2.46% |
| Methionine MET (M) | 4 | 0.82% |
| Leucine LEU (L) | 45 | 9.22% |
| Asparagine ASN (N) | 28 | 5.74% |
| Glutamine GLN (Q) | 55 | 11.27% |
| Proline PRO (P) | 25 | 5.12% |
| Serine SER (S) | 37 | 7.58% |
| Arginine ARG (R) | 30 | 6.15% |
| Threonine THR (T) | 21 | 4.3% |
| Tryptophan TRP (W) | 5 | 1.02% |
| Valine VAL (V) | 33 | 6.76% |
| Tyrosine TYR (Y) | 10 | 2.05% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2358 |
| Hydrogen | H | 3698 |
| Nitrogen | N | 700 |
| Oxygen | O | 726 |
| Sulphur | S | 9 |
| Formula | C2358H3698N700O726S9 |
| Total Number of Atoms: | 7491 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 43 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 42650 Absorption 0.1% (=1 g/l) 0.793, assuming all pairs of CYS residues form cystines Ext. coefficient 42400 Absorption 0.1% (=1 g/l) 0.789, assuming all CYS residues are reduced |
| Aromaticity: | 0.076 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.60 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.07, 28.07, 21.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.9181 |
| Grand average of hydropathicity (GRAVY): | -0.47 |