Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4368 |
| Number of amino acids: | 227 |
| Molecular Weight: | 24424.35 Da |
| Theoretical pI: | 8.33 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 7.49% |
| Cysteine CYS (C) | 4 | 1.76% |
| Glutamic Acid GLU (E) | 3 | 1.32% |
| Aspartic Acid ASP (D) | 14 | 6.17% |
| Glycine GLY (G) | 20 | 8.81% |
| Phynylalanine PHE (F) | 16 | 7.05% |
| Isoleucine ILE (I) | 21 | 9.25% |
| Histidine HIS (H) | 4 | 1.76% |
| Lysine LYS (K) | 14 | 6.17% |
| Methionine MET (M) | 1 | 0.44% |
| Leucine LEU (L) | 20 | 8.81% |
| Asparagine ASN (N) | 15 | 6.61% |
| Glutamine GLN (Q) | 5 | 2.2% |
| Proline PRO (P) | 19 | 8.37% |
| Serine SER (S) | 15 | 6.61% |
| Arginine ARG (R) | 5 | 2.2% |
| Threonine THR (T) | 5 | 2.2% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 21 | 9.25% |
| Tyrosine TYR (Y) | 8 | 3.52% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1129 |
| Hydrogen | H | 1752 |
| Nitrogen | N | 284 |
| Oxygen | O | 310 |
| Sulphur | S | 5 |
| Formula | C1129H1752N284O310S5 |
| Total Number of Atoms: | 3480 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 17 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 12170 Absorption 0.1% (=1 g/l) 0.498, assuming all pairs of CYS residues form cystines Ext. coefficient 11920 Absorption 0.1% (=1 g/l) 0.488, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.31 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [37.89, 30.40, 18.06] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 104.758 |
| Grand average of hydropathicity (GRAVY): | 0.27 |