Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4363 |
| Number of amino acids: | 326 |
| Molecular Weight: | 35364.77 Da |
| Theoretical pI: | 5.69 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 9.2% |
| Cysteine CYS (C) | 8 | 2.45% |
| Glutamic Acid GLU (E) | 17 | 5.21% |
| Aspartic Acid ASP (D) | 19 | 5.83% |
| Glycine GLY (G) | 26 | 7.98% |
| Phynylalanine PHE (F) | 21 | 6.44% |
| Isoleucine ILE (I) | 19 | 5.83% |
| Histidine HIS (H) | 4 | 1.23% |
| Lysine LYS (K) | 17 | 5.21% |
| Methionine MET (M) | 8 | 2.45% |
| Leucine LEU (L) | 31 | 9.51% |
| Asparagine ASN (N) | 16 | 4.91% |
| Glutamine GLN (Q) | 9 | 2.76% |
| Proline PRO (P) | 16 | 4.91% |
| Serine SER (S) | 21 | 6.44% |
| Arginine ARG (R) | 15 | 4.6% |
| Threonine THR (T) | 15 | 4.6% |
| Tryptophan TRP (W) | 1 | 0.31% |
| Valine VAL (V) | 28 | 8.59% |
| Tyrosine TYR (Y) | 5 | 1.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1580 |
| Hydrogen | H | 2504 |
| Nitrogen | N | 422 |
| Oxygen | O | 465 |
| Sulphur | S | 16 |
| Formula | C1580H2504N422O465S16 |
| Total Number of Atoms: | 4987 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 36 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13450 Absorption 0.1% (=1 g/l) 0.380, assuming all pairs of CYS residues form cystines Ext. coefficient 12950 Absorption 0.1% (=1 g/l) 0.366, assuming all CYS residues are reduced |
| Aromaticity: | 0.083 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.90 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.21, 24.23, 26.38] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 93.9264 |
| Grand average of hydropathicity (GRAVY): | 0.12 |