Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4349 |
| Number of amino acids: | 386 |
| Molecular Weight: | 42651.61 Da |
| Theoretical pI: | 5.2 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 9.33% |
| Cysteine CYS (C) | 2 | 0.52% |
| Glutamic Acid GLU (E) | 23 | 5.96% |
| Aspartic Acid ASP (D) | 21 | 5.44% |
| Glycine GLY (G) | 23 | 5.96% |
| Phynylalanine PHE (F) | 18 | 4.66% |
| Isoleucine ILE (I) | 24 | 6.22% |
| Histidine HIS (H) | 6 | 1.55% |
| Lysine LYS (K) | 24 | 6.22% |
| Methionine MET (M) | 12 | 3.11% |
| Leucine LEU (L) | 40 | 10.36% |
| Asparagine ASN (N) | 17 | 4.4% |
| Glutamine GLN (Q) | 14 | 3.63% |
| Proline PRO (P) | 16 | 4.15% |
| Serine SER (S) | 29 | 7.51% |
| Arginine ARG (R) | 10 | 2.59% |
| Threonine THR (T) | 33 | 8.55% |
| Tryptophan TRP (W) | 2 | 0.52% |
| Valine VAL (V) | 18 | 4.66% |
| Tyrosine TYR (Y) | 18 | 4.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1916 |
| Hydrogen | H | 2997 |
| Nitrogen | N | 485 |
| Oxygen | O | 586 |
| Sulphur | S | 14 |
| Formula | C1916H2997N485O586S14 |
| Total Number of Atoms: | 5998 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 37945 Absorption 0.1% (=1 g/l) 0.890, assuming all pairs of CYS residues form cystines Ext. coefficient 37820 Absorption 0.1% (=1 g/l) 0.887, assuming all CYS residues are reduced |
| Aromaticity: | 0.098 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.42 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.09, 22.02, 28.76] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.513 |
| Grand average of hydropathicity (GRAVY): | -0.12 |